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Catalog ID: GM15510
Product (Source):  

Overview

Collection NIGMS Human Genetic Cell Repository
Subcollection Polymorphism Discovery Resource
Pharmacogenetics
Sample Description DNA POLYMORPHISM DISCOVERY RESOURCE COLLECTION
POLYMORPHISM DISCOVERY RESOURCE - PANEL OF 8
POLYMORPHISM DISCOVERY RESOURCE - PANEL OF 24
POLYMORPHISM DISCOVERY RESOURCE - PANEL OF 44
POLYMORPHISM DISCOVERY RESOURCE - PANEL OF 90
POLYMORPHISM DISCOVERY RESOURCE - PANEL OF 450
CYTOCHROME P450, SUBFAMILY IIC, POLYPEPTIDE 9; CYP2C9
This Sample Is Also in Other Products MPDR450 [DNA POLYMORPHISM DISCOVERY RESOURCE COLLECTION]
M24PDR [POLYMORPHISM DISCOVERY RESOURCE - PANEL OF 24]
M44PDR [POLYMORPHISM DISCOVERY RESOURCE - PANEL OF 44]
M08PDR [POLYMORPHISM DISCOVERY RESOURCE - PANEL OF 8]
M90PDR [POLYMORPHISM DISCOVERY RESOURCE - PANEL OF 90]
Biopsy Source Peripheral vein
Cell Type B-Lymphocyte
Tissue Type Blood
Transformant Epstein-Barr Virus
Species Homo sapiens
Common Name Human
Relation to Proband proband
Confirmation Clinical summary/Case history
Remarks donor subject is heterozygous for a C>T change at nucleotide 416 (416C>T) in exon 3 of the CYP2C9 gene (CYP2C9*2) which results in a substitution of cysteine for arginine at codon 144 [Arg144Cys (R144C)]
 
Catalog ID GM15510
Product Cell Culture
Pricing Commercial Pricing: $85.00
Academic and not-for-profit pricing: $85.00
 
Catalog ID NA15510
Product DNA
Quantity 25 µg
Source cell culture
Pricing Commercial Pricing: $55.00
Academic and not-for-profit pricing: $55.00
How to Order Online Ordering
Assurance Form (Must have current form on file)
Statement of Research Intent Form (Information will be entered electronically when order is placed. DO NOT fax form to Coriell Customer Service)

Characterizations

Sample Description DNA POLYMORPHISM DISCOVERY RESOURCE COLLECTION
POLYMORPHISM DISCOVERY RESOURCE - PANEL OF 8
POLYMORPHISM DISCOVERY RESOURCE - PANEL OF 24
POLYMORPHISM DISCOVERY RESOURCE - PANEL OF 44
POLYMORPHISM DISCOVERY RESOURCE - PANEL OF 90
POLYMORPHISM DISCOVERY RESOURCE - PANEL OF 450
CYTOCHROME P450, SUBFAMILY IIC, POLYPEPTIDE 9; CYP2C9
 
IDENTIFICATION OF SPECIES OF ORIGIN Species of Origin Confirmed by Nucleoside Phosphorylase, Glucose-6-Phosphate Dehydrogenase, and Lactate Dehydrogenase Isoenzyme Electrophoresis
 

Phenotypic Data

Remark donor subject is heterozygous for a C>T change at nucleotide 416 (416C>T) in exon 3 of the CYP2C9 gene (CYP2C9*2) which results in a substitution of cysteine for arginine at codon 144 [Arg144Cys (R144C)]

Publications

Bovee D, Zhou Y, Haugen E, Wu Z, Hayden HS, Gillett W, Tuzun E, Cooper GM, Sampas N, Phelps K, Levy R, Morrison VA, Sprague J, Jewett D, Buckley D, Subramaniam S, Chang J, Smith DR, Olson MV, Eichler EE, Kaul R, Closing gaps in the human genome with fosmid resources generated from multiple individuals Nature genetics40:96-101 2007
PubMed ID: 18157130
 
Sharp AJ, Itsara A, Cheng Z, Alkan C, Schwartz S, Eichler EE, Optimal design of oligonucleotide microarrays for measurement of DNA copy-number Human molecular genetics16:2770-9 2007
PubMed ID: 17725982
 
Kidd JM, Cooper GM, Donahue WF, Hayden HS, Sampas N, Graves T, Hansen N, Teague B, Alkan C, Antonacci F, Haugen E, Zerr T, Yamada NA, Tsang P, Newman TL, Tüzün E, Cheng Z, Ebling HM, Tusneem N, David R, Gillett W, Phelps KA, Weaver M, Saranga D, Brand A, Tao W, Gustafson E, McKernan K, Chen L, Malig M, Smith JD, Korn JM, McCarroll SA, Altshuler DA, Peiffer DA, Dorschner M, Stamatoyannopoulos J, Schwartz D, Nickerson DA, Mullikin JC, Wilson RK, Bruhn L, Olson MV, Kaul R, Smith DR, Eichler EE, Mapping and sequencing of structural variation from eight human genomes Nature453:56-64 2007
PubMed ID: 18451855
 
Korbel JO, Urban AE, Affourtit JP, Godwin B, Grubert F, Simons JF, Kim PM, Palejev D, Carriero NJ, Du L, Taillon BE, Chen Z, Tanzer A, Saunders AC, Chi J, Yang F, Carter NP, Hurles ME, Weissman SM, Harkins TT, Gerstein MB, Egholm M, Snyder M, Paired-end mapping reveals extensive structural variation in the human genome Science (New York, NY)318:420-6 2007
PubMed ID: 17901297
 
Phillips Melissa Lee, Lab Tools : Genomic Alterations 2.0 (How to make the most of the evolving technology for detecting copynumber variants.) The Scientist377A:89-92 2007
PubMed ID: 17901297
 
Coleman MA, Yin E, Peterson LE, Nelson D, Sorensen K, Tucker JD, Wyrobek AJ, Low-dose irradiation alters the transcript profiles of human lymphoblastoid cells including genes associated with cytogenetic radioadaptive response Radiation research164:369-82 2005
PubMed ID: 16187739
 
Koukouritaki SB, Poch MT, Cabacungan ET, McCarver DG, Hines RN, Discovery of novel flavin-containing monooxygenase 3 (FMO3) single nucleotide polymorphisms and functional analysis of upstream haplotype variants Molecular pharmacology68:383-92 2005
PubMed ID: 15858076
 
Shapero MH, Zhang J, Loraine A, Liu W, Di X, Liu G, Jones KW, MARA: a novel approach for highly multiplexed locus-specific SNP genotyping using high-density DNA oligonucleotide arrays Nucleic acids research32:e181 2004
PubMed ID: 15601992
 
Deshpande A, Nolan JP, White PS, Valdez YE, Hunt WC, Peyton CL, Wheeler CM, TNF-alpha promoter polymorphisms and susceptibility to human papillomavirus 16-associated cervical cancer The Journal of infectious diseases191:969-76 2004
PubMed ID: 15717274
 
Matsuzaki H, Dong S, Loi H, Di X, Liu G, Hubbell E, Law J, Berntsen T, Chadha M, Hui H, Yang G, Kennedy GC, Webster TA, Cawley S, Walsh PS, Jones KW, Fodor SP, Mei R, Genotyping over 100,000 SNPs on a pair of oligonucleotide arrays. Nat Methods1(2):109-11 2004
PubMed ID: 15782172
 
Hines RN, Luo Z, Hopp KA, Cabacungan ET, Koukouritaki SB, McCarver DG, Genetic variability at the human FMO1 locus: significance of a basal promoter yin yang 1 element polymorphism (FMO1*6) The Journal of pharmacology and experimental therapeutics306:1210-8 2003
PubMed ID: 12829732

External Links

dbSNP dbSNP ID: 1215
Gene Cards CYP2C9
Gene Ontology GO:0004497 monooxygenase activity
GO:0005783 endoplasmic reticulum
GO:0005792 microsome
GO:0006118 electron transport
GO:0016020 membrane
GO:0018676 (S)-limonene 7-monooxygenase activity
GEO GEO Accession No: GSM139130
GEO Accession No: GSM214509
GEO Accession No: GSM214532
GEO Accession No: GSM214533
GEO Accession No: GSM214676
GEO Accession No: GSM214677
GEO Accession No: GSM214678
GEO Accession No: GSM214679
GEO Accession No: GSM214680
GEO Accession No: GSM214681
GEO Accession No: GSM214682
GEO Accession No: GSM214683
GEO Accession No: GSM214684
GEO Accession No: GSM214685
GEO Accession No: GSM214686
GEO Accession No: GSM214687
GEO Accession No: GSM214688
GEO Accession No: GSM214689
GEO Accession No: GSM214690
GEO Accession No: GSM214691
GEO Accession No: GSM214692
GEO Accession No: GSM214693
GEO Accession No: GSM214694
GEO Accession No: GSM214695
GEO Accession No: GSM214696
GEO Accession No: GSM214697
GEO Accession No: GSM214698
GEO Accession No: GSM214699
GEO Accession No: GSM214700
GEO Accession No: GSM214701
GEO Accession No: GSM214702
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GEO Accession No: GSM214705
GEO Accession No: GSM214706
GEO Accession No: GSM215008
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GEO Accession No: GSM215033
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GEO Accession No: GSM215036
GEO Accession No: GSM215037
GEO Accession No: GSM215045
GEO Accession No: GSM215046
GEO Accession No: GSM215047
GEO Accession No: GSM215048
GEO Accession No: GSM215049
GEO Accession No: GSM215050
GEO Accession No: GSM227608
GEO Accession No: GSM228515
GEO Accession No: GSM228516
GEO Accession No: GSM228517
GEO Accession No: GSM228519
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GEO Accession No: GSM228524
GEO Accession No: GSM230070
GEO Accession No: GSM230071
GEO Accession No: GSM230072
GEO Accession No: GSM230073
GEO Accession No: GSM230074
GEO Accession No: GSM230076
GEO Accession No: GSM230080
GEO Accession No: GSM230081
GEO Accession No: GSM230082
GEO Accession No: GSM230083
GEO Accession No: GSM230084
GEO Accession No: GSM230085
GEO Accession No: GSM230086
GEO Accession No: GSM230087
GEO Accession No: GSM230088
GEO Accession No: GSM230089
GEO Accession No: GSM230090
GEO Accession No: GSM230091
GEO Accession No: GSM230092
GEO Accession No: GSM248024
GEO Accession No: GSM248025
GEO Accession No: GSM248053
GEO Accession No: GSM248054
GEO Accession No: GSM248055
GEO Accession No: GSM248056
GEO Accession No: GSM248057
GEO Accession No: GSM248081
GEO Accession No: GSM248082
GEO Accession No: GSM248096
GEO Accession No: GSM248097
GEO Accession No: GSM248126
GEO Accession No: GSM248127
GEO Accession No: GSM248128
GEO Accession No: GSM248129
GEO Accession No: GSM248130
GEO Accession No: GSM248154
GEO Accession No: GSM248155
GEO Accession No: GSM252742
GEO Accession No: GSM252743
GEO Accession No: GSM252744
GEO Accession No: GSM252745
GEO Accession No: GSM252746
GEO Accession No: GSM252747
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GEO Accession No: GSM252749
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GEO Accession No: GSM252751
GEO Accession No: GSM252752
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GEO Accession No: GSM252755
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GEO Accession No: GSM252758
GEO Accession No: GSM252759
GEO Accession No: GSM252760
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GEO Accession No: GSM252763
GEO Accession No: GSM252764
GEO Accession No: GSM252765
GEO Accession No: GSM252766
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GEO Accession No: GSM252769
GEO Accession No: GSM252770
GEO Accession No: GSM252771
GEO Accession No: GSM252772
GEO Accession No: GSM252773
GEO Accession No: GSM252774
GEO Accession No: GSM252775
GEO Accession No: GSM252776
GEO Accession No: GSM252777
GEO Accession No: GSM252778
GEO Accession No: GSM252779
GEO Accession No: GSM253626
GEO Accession No: GSM253627
GEO Accession No: GSM253628
GEO Accession No: GSM253629
GEO Accession No: GSM253630
GEO Accession No: GSM253631
GEO Accession No: GSM253632
GEO Accession No: GSM253633
GEO Accession No: GSM260581
GEO Accession No: GSM260582
GEO Accession No: GSM260583
GEO Accession No: GSM260584
GEO Accession No: GSM282118
GEO Accession No: GSM282140
GEO Accession No: GSM282145
GEO Accession No: GSM282341
GEO Accession No: GSM282352
GEO Accession No: GSM282357
Locus Link LocusLink ID: 1559
OMIM 601130 CYTOCHROME P450, SUBFAMILY IIC, POLYPEPTIDE 9; CYP2C9
PharmGKB Pharmgkb ID (requires login): PA126721215

Images

Data are not available

Protocols

Split Ratio 1:5
Temperature 37 C
Percent CO2 5%
Medium Roswell Park Memorial Institute Medium 1640 with 2mM L-glutamine
Serum 15% fetal bovine serum Not Inactivated
Substrate None specified
Subcultivation Method dilution - add fresh medium

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